Workflow
Georeferencing: The Polygon Method
Georeferencing: The Polygon Method - a guest blog by Michael Yost, Macrofungi Collection Consortium (MaCC) Project Assistant at the Denver Botanic Gardens and active member of the iDigBio GWG.
Webinar: Towards user-definable, semi-automated workflows for curating biodiversity data
iDigBio’s Paleo Digitization Workshop Draws more than 60 Attendees to New Haven
More than 60 paleontologists representing 41 institutions assembled in New Haven, CT the week of September 23rd, 2013 to share ideas, protocols, preferences, and strategies. This was iDigBio’s most populous workshop to date, with an assortment of excellent presentations and ample opportunities for rich discussion.
Advanced GEOLocate Course - Services, Integration, End-to-End Workflows
On Friday, September 6th, Nelson Rios from Tulane University and the FishNet2 project, presented a lecture covering advanced use of GEOLocate software and services available through the web-based Application Programming Interface (API). Using Adobe Connect meeting software, over 30 people came to find out what they can do with GEOLocate tools and services beyond the online public user-interface. The recorded meeting was IT-oriented, but those new to "just what is a service?" were also welcome. Many of the participants were from the recent iDigBio 2nd Train-the-Trainers Georeferencing Workshop and they were eager to pick-up where the TTT2 GEOLocate material ended. (TTT2 Workshop) (TTT2 Blog)
Entomologists Gather for Insect Digitization Workshop in Chicago
Chicago’s Field Museum of Natural History (FMNH) turned out to be the perfect venue for iDigBio’s April 23–25 (2013) Dried Insect Digitization workshop. Overlooking Grant Park and the Chicago lakefront, FMNH provided an exceptionally attractive and hospitable environment with outstanding amenities. About 50 entomologists and digitization professionals from the U.S., Australia, and the United Kingdom attended, bringing together a diverse assemblage of knowledge and skill to address the complex job of digitizing pinned insect collections.
Hackathon and iConference Update Part II
iDigBio Augmenting OCR Working Group provides a detailed update on the recent Hackathon and presentations at iConference 2013, held in Forth Worth, TX, February 12-15.
Workflow Modules and Task Lists
One outgrowth of the DROID (Developing Robust Object-to-Image-to-Data) workflow workshop held in May 2012 was the establishment of a series of working groups, each focused on workflow modules and tasks for various preparation types. The first of these groups, informally called the Flat Sheets and Packets Working Group, was charged with fleshing out task lists for digitizing vascular and non-vascular plant collections. The second group, Pinned Specimens in Trays and Drawers, is investing its time developing modules to support effective entomological digitization workflows. Other preservation types will follow, concluding with the development of an overall project management module designed to provide guidance for developing and managing digitization projects across disciplines and preservation types.
Seeking Effective Efficient Digitization - ZooKeys Publishes iDigBio's 5 Task Clusters
All of us at iDigBio are excited to announce the publication of Five Task Clusters that Enable Efficient and Effective Digitization of Biodiversity Collections in a ZooKeys 209:19-45 (2012) Special Issue No specimen left behind: mass digitization of natural history collections. We look forward to your comments...
Digitization Workflows
Efficient and effective workflows are at the heart of successful biological and paleontological collections digitization. Much work has been done with developing workflows and protocols at the museum and collections level, but few of these workflows have been documented or made available to the larger collections community. iDigBio, through its Documentation pages, is establishing an online repository for sharing existing customized workflows from as many collection types and institutions as possible, an idea that stems largely from the Developing Robust Object-to-Image-to-Data (DROID) workshop held May 30-31, 2012. We have assembled an initial set of workflows, including selected examples from the DROID workshop, as well as those developed by iDigBio staff. Here we offer the beginnings of the repository and encourage those in the community to both discuss the workflows via the forum links, and to contribute to this resource by adding new workflows and updating existing workflows.
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