Data Carpentry: Difference between revisions

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**All welcome. Place/time TBA.
**All welcome. Place/time TBA.


Course Overview - Day 1
Course Overview - Day 1<br/>
8:30-9:00 Introductions / Overview / Why Data Carpentry? / How to organize data projects
8:30-9:00 Introductions / Overview / Why Data Carpentry? / How to organize data projects<br/>
9:00-10:00 Better use of spreadsheets (Tracy Teal)
9:00-10:00 Better use of spreadsheets (Tracy Teal)<br/>
10:00-10:30 Break
10:00-10:30 Break<br/>
10:30-12:00 Better use of spreadsheets part II (Tracy Teal)
10:30-12:00 Better use of spreadsheets part II (Tracy Teal)<br/>
12:00-1:30 Lunch (with OpenRefine Demo - Deb Paul)
12:00-1:30 Lunch (with OpenRefine Demo - Deb Paul)<br/>
1:30-3:00 SQL Introduction (Matt Collins)
1:30-3:00 SQL Introduction (Matt Collins)<br/>
3:00-3:30 Break
3:00-3:30 Break<br/>
3:30-5:00 SQL part II (Matt Collins)
3:30-5:00 SQL part II (Matt Collins)<br/>
5:00-5:30 Review / Wrap up for tomorrow
5:00-5:30 Review / Wrap up for tomorrow<br/>
 
<br/>
Course Overview - Day 2
<br/>
8:30-10:00 Introduction to the shell (Tracy Teal)
Course Overview - Day 2<br/>
10:00-10:30 Break
8:30-10:00 Introduction to the shell (Tracy Teal)<br/>
10:30-12:30 Introduction to R (François Michonneau)
10:00-10:30 Break<br/>
12:30-1:30 Lunch (with OpenRefine Demo - Deb Paul)
10:30-12:30 Introduction to R (François Michonneau)<br/>
1:30-3:00 Manipulating and plotting data in R (François Michonneau)
12:30-1:30 Lunch (with OpenRefine Demo - Deb Paul)<br/>
3:00-3:30 Break
1:30-3:00 Manipulating and plotting data in R (François Michonneau)<br/>
3:30-4:30 Getting data in and out of R/Integrating R in your workflow (François Michonneau)
3:00-3:30 Break<br/>
4:30-5:00 Scaling it up: DEMO using [http://www.iplantcollaborative.org/ci/discovery-environment iPlant Discovery Environment (DE)] (François Michonneau, ...)
3:30-4:30 Getting data in and out of R/Integrating R in your workflow (François Michonneau)<br/>
5:00-5:30 Advanced Shell (Matt C.)
4:30-5:00 Scaling it up: DEMO using [http://www.iplantcollaborative.org/ci/discovery-environment iPlant Discovery Environment (DE)] (François Michonneau, ...)<br/>
5:30-6:00 Review / Wrap up / Evaluations and Feedback
5:00-5:30 Advanced Shell (Matt C.)<br/>
Thank you!
5:30-6:00 Review / Wrap up / Evaluations and Feedback<br/>
Thank you!<br/>


==Link to Workshop Report==
==Link to Workshop Report==

Revision as of 17:20, 22 August 2014

This wiki supports the Data Carpentry Workshop to be held at the University of Florida at iDigBio. (Date to be announced). It is the first in a series of four biodiversity informatics workshops planned in the upcoming year (2014-2015).

Digitization Training Workshops Wiki Home

Planning Team

François Michonneau (iDigBio), Katja Seltmann (TTD-TCN, AMNH), Matt Collins (ACIS - iDigBio), Dan Stoner (ACIS - iDigBio), Deborah Paul (FSU - iDigBio), Tracy K. Teal (BEACON), Pam Soltis (iDigBio PI), Derek Masaki (USGS), Shari Ellis (iDigBio), Kevin Love (iDigBio), Mike Smorul (SESYNC) and assistance from Nirav Merchant at iPlant.

Workshop Evaluation

  • link to pre-workshop survey
  • link here at end of workshop

Agenda

  • pre-workshop meeting (online)
    • Software installed?
    • Instructors available
    • Questions?
  • pre-workshop meeting / dinner day before
    • All welcome. Place/time TBA.

Course Overview - Day 1
8:30-9:00 Introductions / Overview / Why Data Carpentry? / How to organize data projects
9:00-10:00 Better use of spreadsheets (Tracy Teal)
10:00-10:30 Break
10:30-12:00 Better use of spreadsheets part II (Tracy Teal)
12:00-1:30 Lunch (with OpenRefine Demo - Deb Paul)
1:30-3:00 SQL Introduction (Matt Collins)
3:00-3:30 Break
3:30-5:00 SQL part II (Matt Collins)
5:00-5:30 Review / Wrap up for tomorrow


Course Overview - Day 2
8:30-10:00 Introduction to the shell (Tracy Teal)
10:00-10:30 Break
10:30-12:30 Introduction to R (François Michonneau)
12:30-1:30 Lunch (with OpenRefine Demo - Deb Paul)
1:30-3:00 Manipulating and plotting data in R (François Michonneau)
3:00-3:30 Break
3:30-4:30 Getting data in and out of R/Integrating R in your workflow (François Michonneau)
4:30-5:00 Scaling it up: DEMO using iPlant Discovery Environment (DE) (François Michonneau, ...)
5:00-5:30 Advanced Shell (Matt C.)
5:30-6:00 Review / Wrap up / Evaluations and Feedback
Thank you!

Link to Workshop Report

Logistics

Remote Participation

Remote participation will be provided via Adobe Connect: [room URL to be decided]

  • Remote can join those present for notes in (Google Doc) or (MoPad)?

Presentation Documents

  • links to any presentations (like power points) here.

Workshop Recordings

Day 1

  • [8:30am-10:00am]
  • [10:30am-12:00pm]
  • [1:00pm-3:00pm]
  • [3:30-6pm]

Day2

  • [8:30am-10:00am]
  • [10:30am-12:00pm]
  • [1:00pm-3:00pm]
  • [3:30-6pm]

Data Carpentry Resources and Links

Retrieved from "http://www.idigbio.org/wiki/index.php?title=Data_Carpentry&oldid=11257"