Biodiversity Digitization: Celebrating a decade of progress: Difference between revisions

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'''Stewart Edie''' (Department of Paleobiology, National Museum of Natural History, Smithsonian Institution)
'''Stewart Edie''' (Department of Paleobiology, National Museum of Natural History, Smithsonian Institution)
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| 2:30 || Pierre Bonnet (CIRAD, France)
| 2:30 || '''Pierre Bonnet''' (CIRAD, France)
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| 2:40 || Scott Miller (Smithsonian Institution)
| 2:40 || '''Scott Miller''' (Smithsonian Institution)
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| 2:50 || ''Hopping from NEON specimens and samples into a web of linked data''
| 2:50 || ''Hopping from NEON specimens and samples into a web of linked data''

Revision as of 15:53, 9 September 2021

BioDigitization2021 Card.jpg

Social Media

Twitter: #biodigi2021, @idigbio

Conference Registration

Registration is open!
Please register via Zoom: https://bit.ly/3zDMcQS

Conference Resources

Zoom Information

  • Make sure you have upgraded your Zoom client.
  • We suggest the desktop client or mobile app, which use less bandwidth than Zoom in your browser. See Zoom help for more: https://bit.ly/2RM0rzQ.
  • We will be using the Zoom webinar platform. Only speakers' cameras and microphones will be enabled.
  • Please use the Zoom Q&A feature if you have questions for the presenters. The chat function will only be used for discussion.

Kumospace

We will use a website platform called Kumospace for poster Q&A session. Kumospace is similar to Zoom, but more casual and fun (there’s a rooftop pool).
Location: a link to our Kumospace room will be provided via email and during the conference. In the meantime please check out kumospace.com and take a look around to become a little familiar with it.

Remote Poster Session

All posters will be electronic and linked to this wiki page. Presenters have additionally provided five minute prerecorded presentations describing their posters.
Posters should be viewed asynchronously.
We will then be using Kumospace for a live Q&A session on September 22 1:00 - 3:00 PM EDT.

Conference Agenda

DAY ONE: WEDNESDAY, 22 SEPTEMBER 2021

Session One 8:30 - 11:00AM EDT
8:30 Opening
Gil Nelson (iDigBio) & Rebecca Johnson (NMNH)
8:40 Welcome
Kirk Johnson (National Museum of Natural History, Smithsonian Institution)
Oral Presentations

Topic: Innovations: Strategy & Coordination

9:00 David Blackburn (iDigBio, Florida Museum of Natural History, University of Florida)
9:20 Progress in data mobilization: standards, coordination, and linking knowledge

Holly Little (Department of Paleobiology, National Museum of Natural History, Smithsonian Institution)"

9:30 Creating the Building Blocks for Biodiversity Research

Diane Zorich (Digitization Program Office, Smithsonian Institution)

9:40 Translating digitization and data mobilization capacity into the geosciences and other disciplines

Gary Motz (Indiana Geological and Water Survey, Indiana University)

9:50 Session Q&A
10:00 Virtual NMNH Tour: Botany Conveyor Tour

Sylvia Orli, Eric Schuettpelz, Ken Rahim

10:20 Addressing key challenges in biodiversity data mobilization and use through the development of regional capacity.

Maheva Bagard Laursen (Global Biodiversity Information Facility - GBIF, Denmark)

10:30 Digitizing large insect collections - approaches and prioritization for sharing meaningful data and media

Torsten Dikow (Department of Entomology, National Museum of Natural History, Smithsonian Institution)"

10:40 user experience (UX) for citizen science

Mia Ridge (The British Library)

10:50 Session Q&A
Session Two 1:00 - 3:00 PM EDT
Poster Session

Topic: Digitization Spotlights Asynchronous 5 minute prerecorded presentations with Live meet & greet within Kumospace

Session Three 6:00 - 8:00pm EDT
Oral Presentations

Topic: Community

6:00 Mobilizing the US Paleontological Collections Community

Talia Karim (Invertebrate Paleontology, CU Museum of Natural History, University of Colorado)

6:20 South African collections data mobilization and digitization

Michelle Hamer (Natural Science Collections Facility, South African Biodiversity Institute, South Africa)

6:30 DigiVol: Crowdsourcing Collection Digitisation

Paul Flemons (Digital Collections and Citizen Science, Australian Museum)

6:40 WeDigBio—Next steps as the community blends a global data campaign, virtual science festival, and local outreach opportunities

Austin Mast (Department of Biological Science, Florida State University)

6:50 Session Q&A
7:00 Virtual NMNH Tour: Digitizing Molluscs Through Space and Time

Kathy Hollis, Holly Little, John Pfeiffer, Ellen Strong, Bill Moser"

7:10 We’re in this Together: Arctos Community and the Shared Data Ecosystem

Emily Braker (Vertebrate Zoology, CU Museum of Natural History, University of Colorado)

7:20 Wei Song Hwang (Lee Kong Chian Natural History Museum, National University of Singapore)
7:30 Dimitris Koureas (Naturalis Biodiversity Center, Netherlands)
7:40 Regional collaboration through GBIF: Latin America and the Caribbean

Anabela Plos (Global Biodiversity Information Facility - GBIF, Argentina)

7:50 Session Q&A

DAY TWO: THURSDAY, 23 SEPTEMBER 2021

Session Four 8:30 - 11:00AM EDT
8:30 Global Collaboration for Improved Biodiversity Data

Joe Miller, Global Biodiversity Information Facility (GBIF)

Oral Presentations

Topic: Natural History Collections in Grand Challenges

8:50 Rebecca Johnson (National Museum of Natural History, Smithsonian Institution)
9:10 Pam Soltis (iDigBio, Florida Museum of Natural History, University of Florida)
9:20 Yvonne Linton (Walter Reed Biosystematics, National Museum of Natural History, Smithsonian Institution)
9:30 Developments in valuing digital collections data

Helen Hardy (The Natural History Museum, London)

9:40 Session Q&A
9:50 Virtual NMNH Tour: Tlingit Sculpin Hat

Eric Hollinger, Vince Rossi

10:10 Extended Digital Specimens on the Internet

Alex Hardisty (School of Computer Science and Informatics, Cardiff University, United Kingdom)

10:20 Bird’s Eye View of the Past 10 years of Collections Digitization in the U.S.

Barbara Thiers (New York Botanical Garden)

10:30 speciesLink's data cleaning strategies

Dora Canhos (CRIA - Centro de Referência em Informação Ambiental, Brazil)

10:40 Session Q&A
Session Five 1:00 - 3:30 PM EDT
Oral Presentations

Topic: What’s Next

1:00 Fatima Parker (South African National Biodiversity Institute)
1:20 Experiments with knowledge: Equality and access as drivers for collection development

Johannes Vogel (Museum für Naturkunde, Germany)"

1:30
1:40 New Drivers for Digitization at NMNH.

Carol Butler (Collections, National Museum of Natural History, Smithsonian Institution)

1:50 Session Q&A
2:00 Virtual NMNH Tour: Entomology

Floyd Shockley, Torsten Dikow

2:20 Paleo, µCT, Deep Learning pipelines and research applications

Stewart Edie (Department of Paleobiology, National Museum of Natural History, Smithsonian Institution)

2:30 Pierre Bonnet (CIRAD, France)
2:40 Scott Miller (Smithsonian Institution)
2:50 Hopping from NEON specimens and samples into a web of linked data

Paula Mabee (National Ecological Observatory Network - NEON)

3:00 Reed Beaman (National Science Foundation)
3:10 Session Q&A
Session Six 6:00 - 8:00 PM EDT
Panelist Discussion & Conference Wrap-up

Topic: Looking to the Future of Digitization