BioDigiCon 2022
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iDigBio is pleased to invite you to this year’s Biodiversity Digitization Conference (BioDigiCon) to be held virtually on 27-29 September 2022.
Social Media
Twitter: #biodigicon2022, @idigbio
Announcement Page
BioDigiCon 2022 Announcement page
Conference Registration
Registration is open! Please register via Eventbrite: https://www.eventbrite.com/e/2022-biodigicon-tickets-367104919697
Conference Resources
- Virtual Meeting Resources
- iDigBio's Code of Conduct
- Update your Zoom client for the latest security enhancements
Zoom Information
- Make sure you have upgraded your Zoom client.
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- We will be using the Zoom webinar platform. Only speakers' cameras and microphones will be enabled.
- Please use the Zoom Q&A feature if you have questions for the presenters. The chat function will only be used for discussion.
Recording Policy
By attending iDigBio’s online events, you accept that the event will be recorded and posted for later asynchronous viewing.
Conference Agenda
Day 1 - Tuesday, 27 September 2022
Time EDT | Room 1 |
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10:30 - 10:50 | iDigBio: Intro & What's New |
10:50 - 11:00 | iDigBio Project Management |
11:00 - 11:10 | Promoting your collection: Social media, WeDigBio/transcription projects |
11:10 - 12:00 | Discussion session for new and existing TCNs: Reporting, Tracking, Keeping people engaged |
12:00 - 1:00 | Lunch |
Time EDT | Room 1 | Room 2 |
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1:00 - 1:15 | NEW TCN 1 | |
1:15 - 1:30 | NEW TCN 2 | |
1:35 - 1:45 | TPT (Tucker/Zaspel) | Bringing Asian plant diversity to digital life |
1:45 - 1:55 | oVert (Blackburn) | Big-Bee (Seltmann) |
1:55 - 2:05 | LepNet/SCAN (Cobb) | GLOBAL (Budke) |
2:15 - 2:25 | ESB | TORCH (Barroso) |
2:25 - 2:35 | DigIn (Wetzer) | California Phenology (Yost) |
2:35 - 2:45 | Break | Break |
2:45 - 2:55 | PILSBRY (Yeung) | PCC (Rothfels) |
3:05 - 3:15 | Endless Forms (Pace) | SERNEC (Denslow) |
3:15 - 3:25 | SoRo (Allen) | |
3:25 - 3:35 | ||
3:35 - 3:45 | ||
3:45 - 4:15 | Q & A / Open Discussion | |
4:15 - 4:30 | Wrap-Up |
Day 2 - Wednesday, 28 September 2022
Time EDT | Room 1 | Room 2 | Room 3 | |||
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10:00 - 10:10 | Welcome: Gil Nelson Introduction of speaker: Pam Soltis |
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10:10 - 10:30 | Visionary Plenary: Dena Smith | |||||
10:30 - 11:30 | Biodiversity Digitization Lightning presentations | |||||
10:30 - 11:30 | Concurrent Session 1. | Concurrent Session 2 | Concurrent Session 3 | |||
10:30 – 10:40 | US National Science Foundation Review, Steve Ellis | Arctos: A Collaborative and Scalable Collection Management Solution Emily Braker, University of Colorado Museum of Natural History |
Conveyor-driven mass-digitization of a million specimens does not cost a million Hannu Saarenmaa & Janne Karppinen, Bioshare Digitization Ltd, Ilomantsi, Finland | |||
10:40 – 10:50 | US National Science Foundation TIP Program | Post Mortem It Sorts 'Em - Specify 6 and 7: An Overview from a User Perspective Randy Singer, University of Michigan Museum of Zoology |
Using digitisation data to move a herbarium Claire Brandenburger, National Herbarium of NSW, Australian Institute of Botanical Science; Hannah McPherson, National Herbarium of NSW; Andre Badiou, National Herbarium of NSW; Mel Wong, National Herbarium of NSW; Guy Lowe, National Herbarium of NSW. | |||
10:50 – 11:00 | US National Science Foundation Review, Reed Beaman | Symbiota: Managing and Mobilizing Biodiversity Data and Supporting Data Providers Katie Pearson, Symbiota Support Hub; Edward Gilbert, Arizona State University; Nico Franz, Arizona State University; Jenn Yost, California Polytechnic State University; Samanta Orellana, Arizona State University; Greg Post, Arizona State |
I’m Lichen These Images: Workflows established for the GLOBAL TCN project. Laura Briscoe, New York Botanical Garden; Leanna McMillin, New York Botanical Garden | |||
11:00 – 11:10 | US National Science Foundation Review, Q&A | 10 minutes of Q&A with database panel | Digitisation & Mobilisation of CSIRO’s Biological Collections Nicole Fisher, CSIRO; Pete Thrall, CSIRO | |||
11:10 – 11:20 | The Art of Imaging Zach Randall, Florida Museum of Natural History |
Herbarium Pomeranicum Marta Jarosińska, University of Gdańsk |
A workflow for cleaning Notes from Nature data transcriptions Peter Oboyski, Essig Museum of Entomology, UC Berkeley | |||
11:20 – 11:30 | Histological slides and other sequentially sectioned objects in museums can be re-born digital 3D resources Doug Boyer, Duke University (MorphoSource); Jocelyn Triplett, MorphoSource; Julie Winchester, MorphoSource; Jim Hanken, Harvard; Stephen Turney, Harvard; Brendan Haley, Harvard; Breda Zimkus, Harvard |
Tracking biotic association claims across platforms, collections, and institutions. Jorrit Poelen, Ronin Institute / UC Santa Barbara Cheadle Institute for Biodiversity and Ecological Restoration |
New data models create new challenges for data sharing: looking at collections through the lens of events Ely Wallis, Atlas of Living Australia, CSIRO | |||
11:30 – 11:40 | Extending the Digital Extended Specimen Amanda Harmon, A.C. Moore Herbarium (USCH); Csilla Czako, South Carolina Department of Natural Resources; Avery Browning, University of South Carolina School of Earth, Ocean, and Environment; Herrick, Brown, A.C. Moore Herbarium (USCH) |
ArcGIS Online for born digital data: our experience 6 months in Rick Levy, Denver Botanic Gardens; Michelle DePrenger-Levin, Denver Botanic Gardens|| Digitization and Dissemination of Phylogenetic Data: Using MorphoBank for Morphological Matrix Management
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11:40 - 11:50 | |||
11: 50 – 12:00 | A Fully Digitized Herbarium - Workflows to Keep Up 100% Sylvia Orli, Smithsonian Institution; Ingrid Lin, Smithsonian Institution; Nathan Anderson, Smithsonian Institution |
Introducing taxastand and dwctaxon, a pair of R packages for standardizing species names in Darwin Core format Joel Nitta, The University of Tokyo; Wataru Iwasaki, The University of Tokyo |
DAM it All: Media Metadata and Asset Management Across the Museum Alyson Wilkins, Natural History Museum of Utah | |||
12:00 – 12:10 | NMNH - Torsten Dikow | Digi-Leap: Connecting Novel Tools, Machine Learning and Public Participation to Label Digitization Efforts Robert Guralnick, University of Florida; Michael Denslow, University of Florida; Julie Allen, University of Nevada, Reno; Samantha Blickhan, Zooniverse & Adler Planetarium; Raphael LaFrance, University of Florida; Mark Bouslog, Zooniverse & Adler Planetarium; Sean Miller, Zooniverse & Adler Planetarium |
Reading Others’ Herbarium Specimen Barcodes During Mass Digitization Projects David Shorthouse, Agriculture & Agri-Food Canada; Shannon Asencio, Agriculture & Agri-Food Canada | |||
12:10 – 12:20 | NMNH – Rebecca Snyder | |||||
12:20 – 12:30 | NMNH – Holly Little | |||||
12:30 - 1:30 | Lunch |
Time EDT | Room 1 | Room 2 |
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1:30 - 2:30 | Solutions for long-term image storage and accessibility | Data quality: most common data dealbreakers |
2:30 - 3:30 | GBIF, ALA, iDigBio: Aligning systems to benefit data mobilization | Sustaining institutional digitization |
3:30 - 4:30 | Biocultural issues within collections / TK labels | Digital Extended Specimen |
Day 3 - Thursday, 29 September 2022
Time EDT | Room 1 | Room 2 |
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11:00 - 1:00 | Digitization workflows in Symbiota | Capturing trait data: broad, across different taxonomic groups |
1:30 - 3:30 | Progress for paleo digitization | Imaging workshop: Where to start |
3:30 - 4:00 | Looking forward with NSF | |
4:00 - 4:30 | Wrap-Up |