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==Whole-Drawer Digitization Interest Group ==
==[https://www.idigbio.org/wiki/index.php/Digitization_Resources iDigBio's Digitization Resources Wiki Home]==
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This page is devoted to resources and discussion for whole-drawer imaging of dried, pinned insect collection drawers. The interest group schedules regular discussion sessions via Adobe Connect for the purpose of sharing techniques, strategies, uses, improvements, and technology associated with producing a single image of an entire insect drawer. Resources, related documents, and discussion notes are stored below.
==International Whole-Drawer Digitization Interest Group ==
This page is devoted to resources and discussion for whole-drawer and bulk imaging of dried, pinned insect collection drawers and related bulk specimen containers. The interest group schedules regular discussion sessions via Adobe Connect for the purpose of sharing techniques, strategies, uses, improvements, and technology associated with producing a single image of an entire insect drawer. Resources, related documents, and discussion notes are stored below.


== Interest Group Members ==
== Interest Group Members ==


*[http://www.csiro.au/en/Organisation-Structure/Divisions/Ecosystem-Sciences/NicoleFisher.aspx Nicole Fisher (co-coordinator),] [http://www.csiro.au/places/ANIC Australian National Insect Collection]
*[http://www.csiro.au/en/Organisation-Structure/Divisions/Ecosystem-Sciences/NicoleFisher.aspx Nicole Fisher (co-coordinator)], [http://www.csiro.au/places/ANIC Australian National Insect Collection]
*&lt;a href="https://www.idigbio.org/content/meet-idigbio-staff-interview-gil-nelson"&gt;Gil Nelson (co-coordinator),&lt;/a&gt; &lt;a href="http://idigbio.org"&gt;iDigBio&lt;/a&gt;
*[https://www.idigbio.org/content/meet-idigbio-staff-interview-gil-nelson Gil Nelson (co-coordinator)], [http://idigbio.org iDigBio]
*&lt;a href="http://www.nhm.ac.uk/research-curation/about-science/staff-directory/science-facilities/v-blagoderov/index.html"&gt;Vladimir Blagoderov,&lt;/a&gt; &lt;a href="http://www.nhm.ac.uk/index.html"&gt;Natural History Museum&lt;/a&gt;
*[http://www.nhm.ac.uk/research-curation/about-science/staff-directory/science-facilities/v-blagoderov/index.html Vladimir Blagoderov], [http://www.nhm.ac.uk/index.html; Natural History Museum]
*&lt;a href="http://ento.psu.edu/directory/ard19"&gt;Andy Deans,&lt;/a&gt; &lt;a href="http://ento.psu.edu/"&gt;Penn State&lt;/a&gt;
*[http://www.ars.usda.gov/pandp/people/people.htm?personid=39392 Matthew Buffington],  [http://www.ars.usda.gov/main/site_main.htm?modecode=12-45-49-00 Systematic Entomology Laboratory, National Museum of Natural History]
*&lt;a href="http://www.inhs.illinois.edu/staff/index.php?action=list&amp;user_name=chdietri"&gt;Chris Dietrich,&lt;/a&gt; &lt;a href="http://www.inhs.illinois.edu/"&gt;Illinois Natural History Survey&lt;/a&gt;
*[http://deanslab.org/ Andy Deans], [http://sites.psu.edu/frost/ Frost Entomological Museum at Penn State]
*&lt;a href="http://australianmuseum.net.au/staff/paul-flemons"&gt;Paul Flemons,&lt;/a&gt; &lt;a href="http://australianmuseum.net.au/"&gt;Australian Museum&lt;/a&gt;
*[http://www.inhs.illinois.edu/staff/index.php?action=list&amp;user_name=chdietri Chris Dietrich], [http://www.inhs.illinois.edu/ Illinois Natural History Survey]
*&lt;a href="https://ag.purdue.edu/entm/Pages/Profile.aspx?strAlias=jdhollan&amp;intDirDeptID=13"&gt;Jeff Holland,&lt;/a&gt; &lt;a href="https://ag.purdue.edu/entm/Pages/default.aspx"&gt;Purdue&lt;/a&gt;
*[http://australianmuseum.net.au/staff/paul-flemons Paul Flemons], [http://australianmuseum.net.au/ Australian Museum]
*&lt;a href="http://www.zsm.mwn.de/hym/e/stefanschmidt.htm"&gt;Stephan Schmidt,&lt;/a&gt; &lt;a href="http://www.zsm.mwn.de/"&gt;Zoologische Staatssammlung München&lt;/a&gt;
*[https://ag.purdue.edu/entm/Pages/Profile.aspx?strAlias=jdhollan&amp;intDirDeptID=13 Jeff Holland], [https://ag.purdue.edu/entm/Pages/default.aspx Purdue]
*&lt;a href="http://www.southbank.qm.qld.gov.au/Find+out+about/Behind+the+Scenes/Scientific+illustrations/Insect+illustrators/Geoff+Thompson"&gt;Geoff Thompson,&lt;/a&gt; &lt;a href="http://www.qm.qld.gov.au/"&gt;Queensland Museum&lt;/a&gt;
*[mailto:oleksandr.holovachov@nrm.se Oleksandr Holovachov] [http://www.nrm.se/en/menu/researchandcollections/departments/invertebratezoology/staff/oleksandrholovachov.9065.html Swedish Museum of Natural History]
*&lt;a href="https://ag.purdue.edu/entm/Pages/Profile.aspx?strAlias=jzaspel&amp;intDirDeptID=13"&gt;Jennifer Zaspel,&lt;/a&gt; &lt;a href="https://ag.purdue.edu/entm/Pages/default.aspx"&gt;Purdue&lt;/a&gt;
*[mailto:cjohnson@amnh.org Chris Johnson], [http://www.amnh.org/our-research/staff-directory/christine-johnson American Museum of Natural History]
*[https://www.idigbio.org/content/meet-joanna-mccaffrey-idigbio-biodiversity-informatics-manager Joanna McCaffrey], [http://idigbio.org iDigBio]
*[http://www.utexas.edu/tmm/npl/beachcombing/a_molineux.html Ann Molineux], [http://www.utexas.edu/tmm/ The University of Texas at Austin]
*[http://www.upcrc.illinois.edu/team/research-ext.html# David Raila], [http://cs.illinois.edu University of Illinois, Computer Sciences]
*[http://www.zsm.mwn.de/hym/e/stefanschmidt.htm Stefan Schmidt], [http://www.zsm.mwn.de/ Zoologische Staatssammlung München]
*[http://www.naturkundemuseum-berlin.de/en/institution/mitarbeiter/?Fsize=\\\\\\\%270&Lightversion=1/ Bernhard Schurian,] [http://www.naturkundemuseum-berlin.de/en/ Museum fuer Naturkunde Berlin]
*[http://www.naturkundemuseum-berlin.de/en/institution/mitarbeiter/kroupa-alexander/?Fsize=\\\\\\\%270&Lightversion=1/ Alexander Kroupa,] [http://www.naturkundemuseum-berlin.de/en/  Museum fuer Naturkunde Berlin]
*[http://biodiversity.ku.edu/jennifer-thomas Jennifer Thomas,] [http://entomology.biodiversity.ku.edu/ University of Kansas, Biodiversity Institute, Entomology]
*[http://www.southbank.qm.qld.gov.au/Find+out+about/Behind+the+Scenes/Scientific+illustrations/Insect+illustrators/Geoff+Thompson Geoff Thompson], [http://www.qm.qld.gov.au/ Queensland Museum]
*Luc Willemse [http://sciencecentra.nl/leden/naturalis Naturalis Biodiversity Center]
*[https://ag.purdue.edu/entm/Pages/Profile.aspx?strAlias=jzaspel&amp;intDirDeptID=13 Jennifer Zaspel], [https://ag.purdue.edu/entm/Pages/default.aspx Purdue]


== Relevant Papers ==
==Collaborative Notes and Interest Group Documents==
*[https://docs.google.com/document/d/1-YHPmcIgUF7EuXSyj572jVEIRYsuNjBhXoxwG3TnLTo/edit Collaborative Notes Document]
*[https://docs.google.com/document/d/1wc7V6MeJ5uOjfqfPz7vDFtHNRvmhKNA3qV1Qv_6awuQ/edit?usp=sharing Chris Johnson's questions document]
*[https://docs.google.com/spreadsheets/d/1p7huKZ_thDh29EBSYDGiX52EIm0MEj6Uu0DZ7HBuLtY/edit?usp=sharing Chris Johnson's whole-drawer imaging specifications spreadsheet]


*&lt;a href="http://www.pensoft.net/journals/zookeys/article/3083/results-and-insights-from-the-ncsu-insect-museum-gigapan-project"&gt;Results and insights from the NCSU Insect Museum GigaPan project, Bertone, et al.&lt;/a&gt;
==Presentations (PDFs and links)==
*&lt;a href="http://www.pensoft.net/journals/zookeys/article/3169/whole-drawer-imaging-for-digital-management-and-curation-of-a-large-entomological-collection"&gt;Whole-drawer imaging for digital management and curation of a large entomological collection, Mantle, et al.&lt;/a&gt;
* [[Media:Algemene_presentatie_FCD_ENG.pdf|Collections Digitization at Naturalis Biodiversity Center, Joost van Leusen]]
*&lt;a href="http://www.pensoft.net/journals/zookeys/article/3571/invertnet-a-new-paradigm-for-digital-access-to"&gt;InvertNet: a new paradigm for digital access to invertebrate collections, Dietrich, et al.&lt;/a&gt;
* [[Media:Drawer_digitisation_v2.pdf|Drawer Registration Project, Naturalis Bioidiversity Center, Joost van Leusen]]
*&lt;a href="http://www.pensoft.net/journals/zookeys/article/3115/dscan-"&gt;DScan – a high-performance digital scanning system for entomological collections, Schmidt, et al.&lt;/a&gt;
* [[Media:Geology_Street_v2.pdf|Geologystreet, Naturalis Biodiversity Center, Joost van Leusen]]
* [http://vimeo.com/69077229 MetaData Creator software, Vlad Blagoderov (Vimeo)]
* [[Media:Dig-overview.pdf|InvertNet Robotic Whole-drawer imaging project, Chris Dietrich & David Raila]]
* [[Media:AnnM_iDigBio-wholedrawer-imaging.pdf|Whole-drawer digitization in paleontology collections, Ann Molineux]]
* [[Media:WDD_Fisher.pdf|Whole-drawer digitisation at Australian National Insect Collection, Nicole Fisher]]
* [[Media:GT_Hasselblad_Drawer_Talk.pdf|Hasselblad H4D-200MS Drawer Imaging, Geoff Thompson, Queensland Museum]]
* [[Media:Naturalis_microscopic_slides.pdf|Slide imaging at Naturalis Biodiversity Center, Joost van Leusen]]
* DScan, Stefan Schmidt
** [[Media:Idigbio_dscan.pdf|PDF version]]
** [http://idigbio.org/sites/default/files/working-groups/whole-drawer/idigbio_dscan.pptx Power Point version]
* [[Media:WDD_2014.pdf|Digitization efforts at the MfN (Bernhard Schurian)]]
** [[Media:Chat_2014-03-19.pdf|Chat box entries for 2014-03-19 meeting]]
* [[Media:2014_WDD_-_Germars_virtual_collection.pdf|Whole-drawer imaging of insect collections of E.-F. Germar in the Zoological Museum of Lviv National University (Ukraine), Oleksandr Holovachov]]
** [[Media:Chat_History_2014-04-22.pdf|Chat Box entries for the 2014-04-22 meeting]]
 
== Relevant Papers and Documents==
 
*[http://www.pensoft.net/journals/zookeys/article/3083/results-and-insights-from-the-ncsu-insect-museum-gigapan-project Results and insights from the NCSU Insect Museum GigaPan project, Bertone, et al.]
*[http://www.pensoft.net/journals/zookeys/article/3169/whole-drawer-imaging-for-digital-management-and-curation-of-a-large-entomological-collection Whole-drawer imaging for digital management and curation of a large entomological collection, Mantle, et al.]
*[http://www.pensoft.net/journals/zookeys/article/3571/invertnet-a-new-paradigm-for-digital-access-to InvertNet: a new paradigm for digital access to invertebrate collections, Dietrich, et al.]
*[http://www.pensoft.net/journals/zookeys/article/3115/dscan DScan – a high-performance digital scanning system for entomological collections, Schmidt, et al.]
*[http://www.repository.naturalis.nl/document/453900|Digitaliseren van de entomologische collecties van Naturalis Biodiversity Center, Leusen, et. al]
* [[Media:Entomologische_Berichten_sept_2012_EB_72_%285%29_259-262_EN.pdf|Digitization of the entomological collections of Naturalis Biodiversity Center, Leusen paper referenced above, translated to English]]
*[http://pppubs.com/resources/Drawer-imaging-guide.pdf Guide to digitising whole drawers of specimens by Bryan Kalms]
* [[Media:Scanner_build_prelim1.pdf|Building a Long-Bed Inverted Scanner for Digitizing Biological Collections, Jeff Holland]]
* [[Media:Marriage_Sci-art_and_fine_art.pdf|A Marriage of Science and Contemporary Art-working with Maria Fernanda Cardoso, Geoff Thompson, Queensland Museum]]
* [[Media:1742-9994-10-55.pdf|Biodiversity into your hands - A call for a virtual global natural history 'metacollection', Michael Balke, Stefan Schmidt, et al]]
* [[Media:Soup_for_Crowds_pf_smallversion.pdf|Soup for crowds: A new source of data on insect richness, diversity and abundance, Paul Flemons and Beth Mantle]]
* [[Media:J.2041-210X.2010.00051.x.pdf|Bycatches of ecological field studies: bothersome or valuable?, Sascha Buchholz, Martin Kreuels, Andreas Kronshage, Heinrich Terlutter, and Oliver-D. Finch]]


== Relevant Links ==
== Relevant Links ==


*&lt;a href="http://zsm-entomology.de/wiki/Drawer_Digitization_Project_-_Hymenoptera"&gt;Drawer Digitization Project - Hymenoptera (Zoologische Staatssammlung in Munich)&lt;/a&gt;
*[http://zsm-entomology.de/wiki/Drawer_Digitization_Project_-_Hymenoptera Drawer Digitization Project - Hymenoptera (Zoologische Staatssammlung in Munich)]
*[http://www.gigapan.com/gigapans/d411ff831c9507d2a6307ffffbfb8144  Drawer Digitisation Project - Hymenoptera (United States National Museum)]
*[http://www.gigapan.com/gigapans?order=most_popular&query=ncsu Whole drawer scanning at the NCSU Insect Museum]
*[https://www.idigbio.org/sites/default/files/working-groups/whole-drawer/Screen%20Shot%202013-05-09%20at%204.11.19%20PM.png Some of the members at the second meeting]
*[http://www.velehanden.nl/projecten/bekijk/details/project/nat_nbc Crowd Sourcing project for glass slides at Naturalis Biodiversity Center (Google Chrome translates the site nicely)]
*[mailto:IDIGBIOWDD-L@LISTS.UFL.EDU, listserv] IDIGBIOWDD-L@LISTS.UFL.EDU

Latest revision as of 14:42, 8 December 2014

iDigBio's Digitization Resources Wiki Home


International Whole-Drawer Digitization Interest Group

This page is devoted to resources and discussion for whole-drawer and bulk imaging of dried, pinned insect collection drawers and related bulk specimen containers. The interest group schedules regular discussion sessions via Adobe Connect for the purpose of sharing techniques, strategies, uses, improvements, and technology associated with producing a single image of an entire insect drawer. Resources, related documents, and discussion notes are stored below.

Interest Group Members

Collaborative Notes and Interest Group Documents

Presentations (PDFs and links)

Relevant Papers and Documents

Relevant Links

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